Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015922891.1_cds_XP_016471644.1_63958
CDS Infomation

[gene=LOC107793743] [db_xref=GeneID:107793743] [protein=endoribonuclease Dicer homolog 1-like] [protein_id=XP_016471644.1] [location=complement(join(70855..71032,71163..71530,71640..71804,71914..72834,72911..73110,73206..73306,73645..73832))] [gbkey=CDS]
Sequence

ATGATGGCTGACTGTTGTCTTAGACCAGAAGATATTGTAGGAAGAATTGTCACTGCAGCT
CATTCTGGAAAGAGATTTTATGTTGATTGCATTCCCAATGATATGACTGCAGAGAACTCA
TTTCCTAGGAAAGAAGGTTACCTAGGTCCTCTTGAGTACAGCAGTTATGCTGCTTATTAC
AAGCAAAAGTATGGAGTTGATTTGGTCTATAAAAAGCAGCCTCTATTAAGAGGCCGTGGT
GTTTCATATTGCAAGAACCTTCTGTCACCACGATTTGAACATTCAGAAGAACACGAGGGT
GAACTTGAAGAAGCTACTGACAAAACATATTATGTTTTCCTCCCTCCTGAGCTCTGCTTT
TTACATCCACTTCCGGGATCCCTTGTTCGGGGTGCTCAGAGATTGCCCTCGATCATGAGG
AGGGTTGAGAGCATGCTGCTTGCTGTTCAGCTTAAGGATATGATTGGTTACCCTGTCCCA
GCACTGAAGATCTTGGAAGCATTGACAGCTGCTTCCTGCCAAGAGACTTTCTGCTATGAA
AGAGCAGAGCTTCTTGGAGATGCCTATCTGAAATGGGTTGTTAGTCGGTATCTTTTCCTT
AAATATCCCCAGAAACATGAAGGCCAACTCACCAGGATGAGACAACAATTGGTAAGCAAC
ATGGTATTGTACCAATATGCCTTAAATAAGGGACTCCAATCATACATCCAAGCAGATCGA
TTTTCTCCATCGAGGTGGGCTGCTCCAGGGGTGTTGCCTGTGTATGACGAGGACATCAAT
GAAGACGAATCATCCATATTTGGTCATGAAATAACAGAAAATGGGACTGTAGCAGCAAAG
ACTCTTGCTGCTGATGAGTTTGAAGATGAGGAAGCTGAAGAAGGTGAGCTTGATACCGAT
TCAGGTTCGTATCGTGTACTCTCTAGCAAGACGATGGCTGATGTTGTGGAAGCACTGATT
GGCGTATATTATGTTGATGGTGGAAAGTATGCTGCAAACCATTTCATGAAATGGATCGGG
GTTGAGGTTGATTTTGACTTCAAAGAGACTGAGTACTCTATTAGGCCTTATAGCATTCCC
GAGAATGTACTCAGGAGTGTTGACTTTGATAAATTACAAGGTGCTCTGAACATCAGCTTC
AATGATAAAGGCCTACTGCTAGAAGCAATGACTCATGCTTCACGCCCGTCTTCTGGGGTC
TCCTGTTATCAAAGACTGGAGTTTGTGGGTGATGCAGTACTAGATCATCTCATCACGAGG
CACTTGTTCTTTACATACACAGATCTTCCCCCTGGCCGATTAACCGACTTGAGAGCTGCA
GCTGTGAACAATGAGAATTTTGCACGTGTTGCGGTTAAACATGGCCTTCATTTACACCTT
CGTCATGGATCCAGTGCCCTAGAAAAGCAGATTCGTGACTTTGTGAGTGAGGTTAAAAAT
GAACTATCGAAACCAGGTTTCAACTCCTTTGGTTTAGGGGATTGCAAAGCTCCTAAAGTT
CTTGGTGATATTTTTGAATCAATTGCTGGGGCTATTTTTCTTGACAGTGGGTGTGATACT
GCAGTTGTGTGGAAGGTTTTTCAACCATTATTGCATCCAATGGTCACACCAGAAACACTG
CCGATGCATCCAGTTCGTGAACTACAAGAACGTTGTCAACAACAAGCTCAAGGCTTAGAG
TACAAAGCAAGTCGAAGTGGGAATATAGCTACAGTTGAAGTATATGTGGATGGTATTCAG
GTTGGAATGGCTCAGAATCCTCAAAAGAAAATGGCACAGAAGTTGGCTGCCAGGAATGCC
CTTGTTGTGTTGAAAGAGAGGGAGGAAGCCGAAGCTAAGAAGGCTGAAGATGGGAAGAAA
AAGAAGAACGGAAACCCGTCGTATACCAGGCAGACGTTGAATGATATATGCTTACGTAGA
AATTGGCCTATGCCACTGTATCGAAGTGTGCACGAGGGTGGTCCAGCACATGCAAAGAGG
TTTACATATGGTGTACGCGTAAATACTTCAGACAAAGGATGGACAGATGAATGTATCGGA
GAACCTATGCCGAGTGTAAAGAAAGCCAAGGATTCTGCAGCATCTCTACTACTGGAACTC
TTGAATAGATGGTATTCATGA

Peptide Sequence

PEP ID

XP_016471644.1
PEP Infomation

PREDICTED: endoribonuclease Dicer homolog 1-like [Nicotiana tabacum]
Sequence

MMADCCLRPEDIVGRIVTAAHSGKRFYVDCIPNDMTAENSFPRKEGYLGPLEYSSYAAYY
KQKYGVDLVYKKQPLLRGRGVSYCKNLLSPRFEHSEEHEGELEEATDKTYYVFLPPELCF
LHPLPGSLVRGAQRLPSIMRRVESMLLAVQLKDMIGYPVPALKILEALTAASCQETFCYE
RAELLGDAYLKWVVSRYLFLKYPQKHEGQLTRMRQQLVSNMVLYQYALNKGLQSYIQADR
FSPSRWAAPGVLPVYDEDINEDESSIFGHEITENGTVAAKTLAADEFEDEEAEEGELDTD
SGSYRVLSSKTMADVVEALIGVYYVDGGKYAANHFMKWIGVEVDFDFKETEYSIRPYSIP
ENVLRSVDFDKLQGALNISFNDKGLLLEAMTHASRPSSGVSCYQRLEFVGDAVLDHLITR
HLFFTYTDLPPGRLTDLRAAAVNNENFARVAVKHGLHLHLRHGSSALEKQIRDFVSEVKN
ELSKPGFNSFGLGDCKAPKVLGDIFESIAGAIFLDSGCDTAVVWKVFQPLLHPMVTPETL
PMHPVRELQERCQQQAQGLEYKASRSGNIATVEVYVDGIQVGMAQNPQKKMAQKLAARNA
LVVLKEREEAEAKKAEDGKKKKNGNPSYTRQTLNDICLRRNWPMPLYRSVHEGGPAHAKR
FTYGVRVNTSDKGWTDECIGEPMPSVKKAKDSAASLLLELLNRWYS

Transcript Sequence

Gene sequence data has not been registered.